I am an evolutionary biologist broadly interested in genome evolution and patterns of genetic diversity. I primarily use large genomic datasets (based on already published studies) to re-analyse them in a novel comparative genomic framework and discover global patterns of molecular evolution. During my PhD (ANR HotRec) I used meta-analytic approaches and advanced statistics to describe and quantify the diversity and determinants of evolutionary processes (e.g. recombination, GC-biased gene conversion) among a large set of species.
Though I am still a young researcher (PhD defended in late 2022), I was rapidly involved in a wide range of thematics spanning molecular evolution, population genomics and evolutionary biology at a broad sense. My first post-doc is actually about testing an original theory of evolution of gene expression (the runaway process proposed by Thomas Lenormand, ANR CisTransEvol), while I am at the same time involved in the newly arising field of pangenomic and structural variation within genomes (ERC funded, supervised by Claire Mérot). Among these very different topics I find it very interesting to study evolution at many levels of organisation, including genes, genomes, populations and species. I am interested in integrative approaches reconciling different levels of organisation under a more general and synthetic model (e.g. how patterns at the scale of genes could influence global genome evolution, how both are co-evolving).
Alternatively, I am also involved in the development of bio-informatic pipelines as well as modern statistical methods for population genomics, especially Artificial Intelligence. As Deep Learning is getting more and more applications, I believe it is a powerful versatile approach for population genomics. Deep Learning, especially Neural Networks, has proven to be “unreasonably effective” for inferences and predictions on large scale genomic data and almost any problem can be adressed successfuly with Neural Networks.
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PhD in Ecology & Evolution, 2022
University of Rennes 1
Master's Degree in Ecology & Evolution with a major in Modelling, with honors, first of the year, 2019
University of Rennes 1
BSc in Life Sciences and Biology of Organisms, with honors, first of the year, 2017
Pierre and Marie Curie Paris 6 University and Aix-Marseille University
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Advanced
Advanced
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Initiated
Initiated
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Initiated
Initiated
Evolution of cis-regulatory regions and gene expression in diploid species
Recombination landscapes and genome evolution in Angiosperms
Responsibilities include: